Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UCEC rs117699706 chr11:62161659 T/C 1.3E-11 172 22.57 26.27 4.33 KM Plot
UCEC rs11772341 chr7:20680322 T/C 9.52E-12 174 22.67 19.17 4.33 KM Plot
UCEC rs11773053 chr7:20680353 T/C 9.52E-12 174 22.67 19.17 4.33 KM Plot
UCEC rs11775485 chr8:66628114 C/T 1.5E-11 171 4.33 22.7 22.63 KM Plot
UCEC rs118012228 chr11:62155914 G/A 1.06E-11 172 22.57 26.9 4.33 KM Plot
UCEC rs118049526 chr11:62107508 C/T 1.3E-11 172 22.57 26.9 4.33 KM Plot
UCEC rs118147953 chr16:31821935 C/T 1.25E-11 166 22.85 18 4.33 KM Plot
UCEC rs11853818 chr15:84729214 T/A 5.2E-11 173 7.95 27.33 22.6 KM Plot
UCEC rs11859280 chr16:11470372 A/C 3.43E-5 174 22.6 23.57 10.33 KM Plot
UCEC rs11886025 chr2:98279076 G/A 2.67E-10 173 25.67 18.88 2.4 KM Plot
UCEC rs11886239 chr2:98279574 G/A 2.67E-10 173 25.67 18.88 2.4 KM Plot
UCEC rs11904110 chr2:98261802 T/C 3.25E-10 172 25.67 18.67 2.4 KM Plot
UCEC rs11950104 chr5:143583363 G/A 5.68E-9 173 22.57 30.62 2.45 KM Plot
UCEC rs11955302 chr5:143576444 C/T 5.68E-9 173 22.57 30.62 2.45 KM Plot
UCEC rs11972603 chr7:64164090 A/C 0 174 22.57 21.98 2.4 KM Plot